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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902282.1_cds_XP_016452293.1_46547
CDS Infomation

[gene=LOC107776865] [db_xref=GeneID:107776865] [protein=hypersensitive-induced response protein 1-like] [protein_id=XP_016452293.1] [location=join(96322..96528,96712..96832,96977..97068,97148..97228,97479..97494,98200..98558)] [gbkey=CDS]
Sequence

ATGCCATGTTTACAGAGTATGGGCAATTTGTTGTGCTGTGTAAAAGTTGATCAATCCACG
GTTGCAATTACGGAGCAGTTCGGCAAGTATCAAAATGTGCTTCAGCCTGGGTGCCACTGT
CTCCCTTCGTTCCTTGGATTCAAGGTAGCTGGTCATCTCTCCCTCAGGGTGCAGCAACTG
GATGTTCGCTGCGAGACCAAGACAAAGGATAATGTATTTGTCAATGTAGTGGCATCAATT
CAGTACCGTGCTCTTGCAGACAAAGCAAATGATGCTTTCTACAGACTAACCAACACTAAG
GGTCAAATTCAAGCCTATGTTTTCGATGTCATAAGAGCAAGTGTTCCAAAACTCAATATT
GATGATGTTTTCGAGCAGAAAAATGAAATTGCCAGGGCTGTTGAGGATGAACTTGAGAAG
GCTATGTCGGCTTATGGATATGAAATTGTTCAGACACTTATAGTTGATATAGAACCAGAT
GAGCATGTTAAGAGAGGTTTAAATGAAATCAATGCTGCTGCTCGGATGAGGTTGGCTGCT
AATGAGAAGGCAGAGGCAGAGAAGATTTTACAAATTAAAAGGGCTGAAGGAGAGGCAGAG
TCAAAGTATCTCTCAGGATTAGGTATTGCACGACAACGTCAAGCAATTGTGGATGGTTTA
AGAGACAGTGTGCTTGGCTTCTCAGTGAATGTGCCTGGAACCTCGGCAAAGGATGTTATG
GACATGGTCCTTTTAACTCAGTACTTTGACACCATGAAAGAAATTGGCGCTTCCAGCAAA
TCATCTGCCATTTTCCTTCCTCATGGGCCTGGTGCTGTAAGAGATGTGGCAAGCCAGATT
CGTGACGGACTCCTTCAAGCTTCTACTGAGCGTTAA

Peptide Sequence

PEP ID

XP_016452293.1
PEP Infomation

PREDICTED: hypersensitive-induced response protein 1-like [Nicotiana tabacum]
Sequence

MPCLQSMGNLLCCVKVDQSTVAITEQFGKYQNVLQPGCHCLPSFLGFKVAGHLSLRVQQL
DVRCETKTKDNVFVNVVASIQYRALADKANDAFYRLTNTKGQIQAYVFDVIRASVPKLNI
DDVFEQKNEIARAVEDELEKAMSAYGYEIVQTLIVDIEPDEHVKRGLNEINAAARMRLAA
NEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSVNVPGTSAKDVM
DMVLLTQYFDTMKEIGASSKSSAIFLPHGPGAVRDVASQIRDGLLQASTER

Transcript Sequence

Gene sequence data has not been registered.